Packages/BioArchLinux/r-reticulate/PKGBUILD

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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
# Contributor: Robert Greener <me@r0bert.dev>
_pkgname=reticulate
_pkgver=1.41.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Interface to 'Python'"
arch=(x86_64)
url="https://cran.r-project.org/package=$_pkgname"
license=('Apache-2.0')
depends=(
python
r-here
r-jsonlite
r-png
r-rappdirs
r-rcpp
r-rcpptoml
r-rlang
r-withr
)
checkdepends=(
ipython
python-docutils
python-matplotlib
python-numpy
python-pandas
python-pipenv
python-plotly
python-poetry
python-scipy
python-tabulate
python-wrapt
r-rmarkdown
r-testthat
)
optdepends=(
"ipython: IPython console app"
"python-numpy: translation between R matrices and NumPy arrays"
r-callr
r-cli
r-glue
r-knitr
r-pillar
r-rmarkdown
r-testthat
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('51fde3c20c139a9254ec45782fe3af8a')
b2sums=('b3370b75a8a22cf8f214f04e75a6e039e3d5f94d0dc2b6b6c93f4d5b6e448aebbce3a671286c2fd3d076494337b4136df0a714fafb6448b69192e7b180a85cd3')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
# compile python bytecode
python -m compileall -o 0 -o 1 -s build -p /usr/lib/R/library "build/$_pkgname/python/rpytools"
}
check() {
cd "$_pkgname/tests"
R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}