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31 lines
1.1 KiB
Bash
31 lines
1.1 KiB
Bash
# Maintainer: Clint Valentine <valentine.clint@gmail.com>
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pkgname='artemis'
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pkgver=18.2.0
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pkgrel=5
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pkgdesc='A genome viewer and annotation tool that visualizes biological sequence features'
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arch=('x86_64')
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url=https://www.sanger.ac.uk/science/tools/"${pkgname}"
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license=('GPL2')
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depends=('java-runtime>=1.6')
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source=("${pkgname}"-"${pkgver}".tar.gz::https://github.com/sanger-pathogens/Artemis/releases/download/v${pkgver}/artemis-unix-release-${pkgver}.tar.gz)
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sha256sums=('06441e1abab139cb0a09d5844cb1b84ae727ace53a6c0efdd1eea8d8cfab8382')
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package() {
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cd "${srcdir}"/"${pkgname}"
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sed -i 's#ARTEMIS_HOME=`dirname "$PRG"`/.#ARTEMIS_HOME=/opt/artemis/#' art
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sed -i 's#ACT_HOME=`dirname "$PRG"`/.#ACT_HOME=/opt/artemis/#' act
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sed -i 's#ARTEMIS_HOME=`dirname "$PRG"`/.#ARTEMIS_HOME=/opt/artemis/#' dnaplotter
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mkdir -p "${pkgdir}"/opt/"${pkgname}"/
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cp -a * "${pkgdir}"/opt/"${pkgname}"/
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scripts=('act' 'art' 'dnaplotter')
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for script in "${scripts[@]}"; do
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install -Dm775 "${script}" "${pkgdir}"/usr/bin/"${script}"
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rm "${pkgdir}"/opt/"${pkgname}"/"${script}"
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done
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install -Dm644 README.md "${pkgdir}"/usr/share/doc/"${pkgname}"/README.md
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}
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