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https://github.com/BioArchLinux/Packages.git
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56 lines
1 KiB
Bash
56 lines
1 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=aroma.affymetrix
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_pkgver=3.2.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Analysis of Large Affymetrix Microarray Data Sets'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('LGPL')
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depends=(
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r
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r-aroma.apd
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r-aroma.core
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r-future
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r-listenv
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r-matrixstats
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r-r.cache
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r-r.devices
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r-r.filesets
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r-r.methodss3
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r-r.oo
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r-r.utils
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)
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optdepends=(
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r-affxparser
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r-affy
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r-affymetrixdatatestfiles
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r-affyplm
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r-aroma.light
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r-biobase
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r-biocgenerics
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r-dbi
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r-dchipio
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r-gcrma
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r-gsmoothr
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r-limma
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r-oligo
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r-oligoclasses
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r-pdinfobuilder
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r-preprocesscore
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r-rcolorbrewer
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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