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58 lines
1 KiB
Bash
58 lines
1 KiB
Bash
# system requirements: C++14
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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=DIAlignR
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_pkgver=2.2.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Dynamic Programming Based Alignment of MS2 Chromatograms'
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arch=('x86_64')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-ape
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r-bit64
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r-data.table
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r-dbi
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r-dplyr
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r-ggplot2
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r-magrittr
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r-mzr
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r-phangorn
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r-pracma
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r-rcpp
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r-rcppeigen
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r-reticulate
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r-rlang
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r-rmsnumpress
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r-rsqlite
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r-signal
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r-tidyr
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r-zoo
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)
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optdepends=(
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r-akima
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r-biocparallel
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r-biocstyle
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r-gridextra
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r-knitr
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r-lattice
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r-latticeextra
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r-rmarkdown
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r-scales
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r-testthat
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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