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65 lines
1.2 KiB
Bash
65 lines
1.2 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=EventPointer
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_pkgver=3.2.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='An effective identification of alternative splicing events using junction arrays and RNA-Seq data'
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arch=('x86_64')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('Artistic2.0')
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depends=(
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r
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r-abind
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r-affxparser
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r-biostrings
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r-bsgenome
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r-cobs
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r-doparallel
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r-foreach
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r-genomeinfodb
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r-genomicfeatures
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r-genomicranges
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r-glmnet
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r-graph
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r-igraph
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r-iranges
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r-iterators
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r-limma
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r-lpsolve
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r-matrixstats
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r-nnls
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r-poibin
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r-prodlim
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r-qvalue
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r-rbgl
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r-rhdf5
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r-s4vectors
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r-sgseq
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r-speedglm
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r-stringr
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r-summarizedexperiment
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r-tximport
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)
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optdepends=(
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r-biocgenerics
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r-biocstyle
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r-dplyr
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r-kableextra
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r-knitr
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r-rmarkdown
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r-runit
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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