mirror of
https://github.com/BioArchLinux/Packages.git
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50 lines
969 B
Bash
50 lines
969 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=graphite
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_pkgver=1.40.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='GRAPH Interaction from pathway Topological Environment'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('AGPL')
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depends=(
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r
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r-annotationdbi
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r-checkmate
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r-graph
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r-httr
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r-rappdirs
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)
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optdepends=(
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r-a4preproc
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r-all
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r-biocstyle
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r-clipper
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r-codetools
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r-hgu133plus2.db
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r-hgu95av2.db
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r-impute
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r-knitr
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r-org.hs.eg.db
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r-parallel
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r-r.rsp
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r-rcy3
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r-rmarkdown
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r-spia
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r-testthat
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r-topologygsa
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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