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68 lines
1.2 KiB
Bash
68 lines
1.2 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=ISAnalytics
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_pkgver=1.4.2
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studies'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('CCPL:by-nc-sa')
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depends=(
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r
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r-biocparallel
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r-data.table
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r-dplyr
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r-fs
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r-ggplot2
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r-ggrepel
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r-lifecycle
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r-lubridate
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r-magrittr
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r-psych
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r-purrr
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r-rcapture
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r-readr
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r-readxl
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r-rlang
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r-stringr
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r-tibble
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r-tidyr
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r-zip
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)
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optdepends=(
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r-biocstyle
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r-circlize
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r-covr
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r-dt
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r-eulerr
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r-extradistr
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r-flexdashboard
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r-ggalluvial
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r-gridextra
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r-gtools
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r-knitr
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r-plotly
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r-r.utils
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r-refmanager
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r-rmarkdown
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r-roxygen2
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r-scales
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r-sessioninfo
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r-testthat
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r-vegan
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r-withr
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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