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61 lines
1.1 KiB
Bash
61 lines
1.1 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=MIGSA
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_pkgver=1.18.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Massive and Integrative Gene Set Analysis'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-annotationdbi
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r-biobase
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r-biocgenerics
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r-biocparallel
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r-data.table
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r-edger
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r-futile.logger
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r-ggdendro
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r-ggplot2
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r-go.db
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r-gostats
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r-graph
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r-gseabase
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r-ismev
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r-jsonlite
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r-limma
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r-matrixstats
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r-org.hs.eg.db
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r-rbgl
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r-reshape2
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r-rgraphviz
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r-vegan
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)
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optdepends=(
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r-biocstyle
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r-breastcancermainz
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r-breastcancernki
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r-breastcancertransbig
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r-breastcancerunt
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r-breastcancerupp
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r-breastcancervdx
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r-knitr
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r-mgsz
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r-migsadata
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r-runit
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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