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50 lines
1 KiB
Bash
50 lines
1 KiB
Bash
# system requirements: Cytoscape (>= 3.7.1), CyREST (>= 3.8.0)
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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=RCy3
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_pkgver=2.14.1
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Functions to Access and Control Cytoscape'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('MIT')
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depends=(
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r
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r-base64enc
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r-base64url
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r-biocgenerics
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r-fs
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r-glue
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r-graph
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r-httr
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r-irdisplay
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r-irkernel
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r-rcolorbrewer
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r-rcurl
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r-rjsonio
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r-uchardet
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r-uuid
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r-xml
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)
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optdepends=(
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r-biocstyle
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r-grdevices
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r-igraph
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r-knitr
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r-rmarkdown
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
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}
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# vim:set ts=2 sw=2 et:
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