mirror of
https://github.com/BioArchLinux/Packages.git
synced 2025-03-10 12:02:42 +00:00
37 lines
932 B
Bash
37 lines
932 B
Bash
# system requirements: Java (>= 1.8)
|
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
|
|
|
|
_pkgname=sarks
|
|
_pkgver=1.6.0
|
|
pkgname=r-${_pkgname,,}
|
|
pkgver=${_pkgver//[:-]/.}
|
|
pkgrel=1
|
|
pkgdesc='Suffix Array Kernel Smoothing for discovery of correlative sequence motifs and multi-motif domains'
|
|
arch=('any')
|
|
url="https://bioconductor.org/packages/${_pkgname}"
|
|
license=('BSD')
|
|
depends=(
|
|
r
|
|
r-binom
|
|
r-biostrings
|
|
r-iranges
|
|
r-rjava
|
|
)
|
|
optdepends=(
|
|
r-biocgenerics
|
|
r-ggplot2
|
|
r-runit
|
|
)
|
|
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
|
|
sha256sums=('a')
|
|
|
|
build() {
|
|
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
|
|
}
|
|
|
|
package() {
|
|
install -dm0755 "${pkgdir}/usr/lib/R/library"
|
|
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
|
|
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
|
|
}
|
|
# vim:set ts=2 sw=2 et:
|