Packages/prepare/r-srgnet/PKGBUILD
2022-01-12 08:18:24 +00:00

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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SRGnet
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//[:-]/.}
pkgrel=1
pkgdesc='An R package for studying synergistic response to gene mutations from transcriptomics data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-ebcoexpress
r-mass
r-igraph
r-pvclust
r-gdm
r-limma
r-matrixstats
r-hmisc
)
makedepends=(
git
tar
)
optdepends=(
r-knitr
r-rmarkdown
)
source=("git+https://git.bioconductor.org/packages/${_pkgname}.git")
sha256sums=('SKIP')
build() {
tar -zcvf ${_pkgname}.tar.gz ${_pkgname}
R CMD INSTALL ${_pkgname}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: