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60 lines
1.1 KiB
Bash
60 lines
1.1 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=ViSEAGO
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_pkgver=1.8.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='ViSEAGO: a Bioconductor package for clustering biological functions using Gene Ontology and semantic similarity'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-annotationdbi
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r-annotationforge
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r-biomart
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r-data.table
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r-dendextend
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r-diagrammer
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r-dt
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r-dynamictreecut
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r-fgsea
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r-ggplot2
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r-go.db
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r-gosemsim
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r-heatmaply
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r-htmlwidgets
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r-igraph
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r-plotly
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r-processx
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r-r.utils
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r-rcolorbrewer
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r-scales
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r-topgo
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r-upsetr
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)
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optdepends=(
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r-biocmanager
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r-biocstyle
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r-corrplot
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r-htmltools
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r-knitr
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r-limma
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r-org.mm.eg.db
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r-remotes
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r-rgraphviz
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r-rmarkdown
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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