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70 lines
1.3 KiB
Bash
70 lines
1.3 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=celda
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_pkgver=1.10.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='CEllular Latent Dirichlet Allocation'
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arch=('x86_64')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('MIT')
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depends=(
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r
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r-circlize
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r-complexheatmap
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r-data.table
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r-dbscan
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r-delayedarray
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r-digest
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r-doparallel
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r-enrichr
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r-foreach
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r-ggplot2
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r-ggrepel
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r-gtable
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r-matrixstats
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r-mcmcprecision
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r-multipanelfigure
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r-plyr
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r-rcolorbrewer
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r-rcpp
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r-rcppeigen
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r-reshape2
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r-rtsne
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r-s4vectors
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r-scales
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r-scater
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r-scran
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r-singlecellexperiment
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r-stringr
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r-summarizedexperiment
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r-uwot
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r-withr
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)
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optdepends=(
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r-biocmanager
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r-biocstyle
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r-biomart
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r-covr
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r-knitr
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r-m3dexampledata
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r-rmarkdown
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r-roxygen2
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r-singlecelltk
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r-tenxpbmcdata
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r-testthat
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
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}
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# vim:set ts=2 sw=2 et:
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