mirror of
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41 lines
889 B
Bash
41 lines
889 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=cn.farms
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_pkgver=1.42.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='cn.FARMS - factor analysis for copy number estimation'
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arch=('x86_64')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('LGPL')
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depends=(
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r
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r-affxparser
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r-biobase
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r-dbi
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r-dnacopy
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r-ff
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r-oligo
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r-oligoclasses
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r-preprocesscore
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r-snow
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)
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optdepends=(
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r-pd.genomewidesnp.5
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r-pd.genomewidesnp.6
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r-pd.mapping250k.nsp
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r-pd.mapping250k.sty
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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