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68 lines
1.2 KiB
Bash
68 lines
1.2 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=dce
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_pkgver=1.2.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Pathway Enrichment Based on Differential Causal Effects'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-assertthat
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r-combinepvalue
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r-dplyr
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r-edger
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r-epinem
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r-expm
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r-ggplot2
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r-ggraph
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r-glm2
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r-glue
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r-graph
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r-graphite
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r-harmonicmeanp
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r-igraph
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r-logger
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r-metap
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r-mnem
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r-naturalsort
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r-org.hs.eg.db
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r-pcalg
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r-ppcor
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r-purrr
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r-reshape2
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r-rgraphviz
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r-rlang
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r-tidygraph
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r-tidyverse
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)
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optdepends=(
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r-biocstyle
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r-cowplot
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r-curatedtcgadata
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r-dagitty
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r-devtools
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r-formatr
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r-knitr
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r-lmtest
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r-rmarkdown
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r-sandwich
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r-summarizedexperiment
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r-tcgautils
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r-testthat
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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