mirror of
https://github.com/BioArchLinux/Packages.git
synced 2025-03-10 12:02:42 +00:00
51 lines
990 B
Bash
51 lines
990 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
|
|
|
|
_pkgname=GWASTools
|
|
_pkgver=1.40.0
|
|
pkgname=r-${_pkgname,,}
|
|
pkgver=${_pkgver//[:-]/.}
|
|
pkgrel=1
|
|
pkgdesc='Tools for Genome Wide Association Studies'
|
|
arch=('any')
|
|
url="https://bioconductor.org/packages/${_pkgname}"
|
|
license=('Artistic2.0')
|
|
depends=(
|
|
r
|
|
r-biobase
|
|
r-data.table
|
|
r-dbi
|
|
r-dnacopy
|
|
r-gdsfmt
|
|
r-gwasexacthw
|
|
r-lmtest
|
|
r-logistf
|
|
r-quantsmooth
|
|
r-rsqlite
|
|
r-sandwich
|
|
)
|
|
optdepends=(
|
|
r-biocgenerics
|
|
r-biostrings
|
|
r-genomicranges
|
|
r-gwasdata
|
|
r-iranges
|
|
r-ncdf4
|
|
r-parallel
|
|
r-runit
|
|
r-s4vectors
|
|
r-snprelate
|
|
r-snpstats
|
|
r-variantannotation
|
|
)
|
|
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
|
|
sha256sums=('a')
|
|
|
|
build() {
|
|
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
|
|
}
|
|
|
|
package() {
|
|
install -dm0755 "${pkgdir}/usr/lib/R/library"
|
|
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
|
|
}
|
|
# vim:set ts=2 sw=2 et:
|