mirror of
https://github.com/BioArchLinux/Packages.git
synced 2025-03-10 12:02:42 +00:00
44 lines
930 B
Bash
44 lines
930 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
|
|
|
|
_pkgname=Harman
|
|
_pkgver=1.22.0
|
|
pkgname=r-${_pkgname,,}
|
|
pkgver=${_pkgver//[:-]/.}
|
|
pkgrel=1
|
|
pkgdesc='The removal of batch effects from datasets using a PCA and constrained optimisation based technique'
|
|
arch=('x86_64')
|
|
url="https://bioconductor.org/packages/${_pkgname}"
|
|
license=('GPL')
|
|
depends=(
|
|
r
|
|
r-rcpp
|
|
)
|
|
optdepends=(
|
|
r-affydata
|
|
r-biocgenerics
|
|
r-biocstyle
|
|
r-bladderbatch
|
|
r-harmandata
|
|
r-knitr
|
|
r-limma
|
|
r-lumi
|
|
r-minfi
|
|
r-minfidata
|
|
r-msmseda
|
|
r-rcolorbrewer
|
|
r-rmarkdown
|
|
r-runit
|
|
r-sva
|
|
)
|
|
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
|
|
sha256sums=('a')
|
|
|
|
build() {
|
|
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
|
|
}
|
|
|
|
package() {
|
|
install -dm0755 "${pkgdir}/usr/lib/R/library"
|
|
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
|
|
}
|
|
# vim:set ts=2 sw=2 et:
|