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https://github.com/BioArchLinux/Packages.git
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53 lines
1 KiB
Bash
53 lines
1 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=IRISFGM
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_pkgver=1.2.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Comprehensive Analysis of Gene Interactivity Networks Based on Single-Cell RNA-Seq'
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arch=('x86_64')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-adaptgauss
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r-annotationdbi
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r-anocva
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r-clusterprofiler
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r-colorspace
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r-desingle
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r-drimpute
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r-ggplot2
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r-ggpubr
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r-ggraph
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r-igraph
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r-knitr
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r-mcl
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r-mixtools
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r-org.hs.eg.db
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r-org.mm.eg.db
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r-pheatmap
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r-polychrome
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r-rcolorbrewer
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r-rcpp
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r-scater
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r-scran
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r-seurat
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r-singlecellexperiment
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)
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optdepends=(
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r-rmarkdown
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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