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82 lines
1.3 KiB
Bash
82 lines
1.3 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=MicrobiotaProcess
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_pkgver=1.6.2
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='an R package for analysis, visualization and biomarker discovery of microbiome'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-ape
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r-biostrings
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r-coin
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r-dplyr
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r-dtplyr
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r-foreach
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r-ggplot2
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r-ggrepel
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r-ggsignif
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r-ggstar
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r-ggtree
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r-ggtreeextra
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r-magrittr
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r-patchwork
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r-pillar
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r-rlang
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r-summarizedexperiment
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r-tibble
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r-tidyr
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r-tidyselect
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r-tidytree
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r-treeio
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r-vegan
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r-zoo
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)
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optdepends=(
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r-aplot
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r-biomformat
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r-cli
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r-corrr
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r-decipher
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r-forcats
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r-ggalluvial
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r-ggh4x
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r-gghalves
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r-ggnewscale
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r-ggside
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r-ggupset
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r-ggvenndiagram
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r-glue
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r-knitr
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r-nlme
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r-phangorn
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r-phyloseq
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r-picante
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r-plyr
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r-prettydoc
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r-purrr
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r-randomforest
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r-rmarkdown
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r-s4vectors
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r-scales
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r-seqmagick
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r-testthat
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r-withr
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r-yaml
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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