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71 lines
1.2 KiB
Bash
71 lines
1.2 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=MSnbase
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_pkgver=2.20.1
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Base Functions and Classes for Mass Spectrometry and Proteomics'
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arch=('x86_64')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('Artistic2.0')
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depends=(
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r
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r-affy
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r-biobase
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r-biocgenerics
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r-biocparallel
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r-digest
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r-ggplot2
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r-impute
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r-iranges
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r-maldiquant
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r-mscoreutils
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r-mzid
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r-mzr
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r-pcamethods
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r-plyr
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r-protgenerics
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r-rcpp
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r-s4vectors
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r-scales
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r-vsn
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r-xml
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)
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optdepends=(
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r-annotationhub
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r-biocstyle
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r-gplots
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r-gridextra
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r-imputelcmd
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r-knitr
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r-magrittr
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r-microbenchmark
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r-msdata
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r-norm
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r-proloc
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r-prolocdata
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r-pryr
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r-rdisop
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r-rgl
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r-rmarkdown
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r-rols
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r-roxygen2
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r-rpx
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r-shiny
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r-summarizedexperiment
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r-testthat
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r-zoo
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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