mirror of
https://github.com/BioArchLinux/Packages.git
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60 lines
1.2 KiB
Bash
60 lines
1.2 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=oligoClasses
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_pkgver=1.56.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Classes for high-throughput arrays supported by oligo and crlmm'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-affyio
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r-biobase
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r-biocgenerics
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r-biocmanager
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r-biostrings
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r-dbi
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r-ff
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r-foreach
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r-genomicranges
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r-iranges
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r-rsqlite
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r-s4vectors
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r-summarizedexperiment
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)
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optdepends=(
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r-crlmm
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r-domc
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r-dompi
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r-doparallel
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r-doredis
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r-dosnow
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r-genomewidesnp5crlmm
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r-genomewidesnp6crlmm
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r-hapmapsnp5
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r-hapmapsnp6
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r-human370v1ccrlmm
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r-pd.genomewidesnp.5
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r-pd.genomewidesnp.6
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r-pd.mapping250k.nsp
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r-pd.mapping250k.sty
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r-pd.mapping50k.hind240
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r-pd.mapping50k.xba240
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r-runit
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r-vanillaice
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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