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51 lines
976 B
Bash
51 lines
976 B
Bash
# system requirements: OpenBabel
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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=RMassBank
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_pkgver=3.4.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Workflow to process tandem MS files and build MassBank records'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('Artistic2.0')
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depends=(
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r
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r-assertthat
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r-biobase
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r-digest
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r-envipat
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r-httr
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r-logger
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r-msnbase
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r-mzr
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r-rcdk
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r-rcpp
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r-rcurl
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r-rjson
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r-s4vectors
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r-xml
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r-yaml
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)
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optdepends=(
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r-biocstyle
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r-camera
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r-gplots
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r-knitr
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r-rmassbankdata
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r-runit
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r-xcms
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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