mirror of
https://github.com/BioArchLinux/Packages.git
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48 lines
915 B
Bash
48 lines
915 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=scde
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_pkgver=2.22.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='Single Cell Differential Expression'
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arch=('x86_64')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-biocparallel
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r-cairo
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r-edger
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r-extremes
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r-flexmix
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r-pcamethods
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r-quantreg
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r-rcolorbrewer
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r-rcpp
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r-rcpparmadillo
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r-rjson
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r-rmtstat
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r-rook
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)
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optdepends=(
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r-cba
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r-fastcluster
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r-go.db
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r-knitr
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r-org.hs.eg.db
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r-rmarkdown
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r-wgcna
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('a')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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