mirror of
https://github.com/BioArchLinux/Packages.git
synced 2025-03-10 12:02:42 +00:00
50 lines
945 B
Bash
50 lines
945 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
|
|
|
|
_pkgname=synapter
|
|
_pkgver=2.18.0
|
|
pkgname=r-${_pkgname,,}
|
|
pkgver=${_pkgver//[:-]/.}
|
|
pkgrel=1
|
|
pkgdesc='Label-free data analysis pipeline for optimal identification and quantitation'
|
|
arch=('any')
|
|
url="https://bioconductor.org/packages/${_pkgname}"
|
|
license=('GPL')
|
|
depends=(
|
|
r
|
|
r-rcolorbrewer
|
|
r-lattice
|
|
r-qvalue
|
|
r-multtest
|
|
r-biobase
|
|
r-knitr
|
|
r-biostrings
|
|
r-cleaver
|
|
r-readr
|
|
r-rmarkdown
|
|
r-msnbase
|
|
)
|
|
makedepends=(
|
|
git
|
|
tar
|
|
)
|
|
optdepends=(
|
|
r-synapterdata
|
|
r-xtable
|
|
r-testthat
|
|
r-brain
|
|
r-biocstyle
|
|
)
|
|
source=("git+https://git.bioconductor.org/packages/${_pkgname}.git")
|
|
sha256sums=('SKIP')
|
|
|
|
build() {
|
|
tar -zcvf ${_pkgname}.tar.gz ${_pkgname}
|
|
R CMD INSTALL ${_pkgname}.tar.gz -l "${srcdir}"
|
|
}
|
|
|
|
package() {
|
|
install -dm0755 "${pkgdir}/usr/lib/R/library"
|
|
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
|
|
}
|
|
# vim:set ts=2 sw=2 et:
|
|
|