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29 lines
836 B
Bash
29 lines
836 B
Bash
# Maintainer: PumpkinCheshire <sollyonzou at gmail dot com>
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pkgname=bwa
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pkgver=0.7.17.r47.gb56db22
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pkgrel=1
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pkgdesc="Burrows-Wheeler Aligner maps low-divergent sequences against a large reference genome. https://doi.org/10.1093/bioinformatics/btp324"
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arch=('x86_64')
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url="http://bio-bwa.sourceforge.net/"
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license=('GPL3')
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depends=('perl' 'zlib')
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makedepends=('git' 'make')
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source=('git+https://github.com/lh3/bwa.git')
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sha256sums=('SKIP')
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pkgver() {
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git -C ${pkgname} describe --long --tags | sed 's/^v//;s/\([^-]*-g\)/r\1/;s/-/./g'
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}
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build() {
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cd "$srcdir/${pkgname}"
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make
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}
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package() {
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install -Dm755 -t "${pkgdir}/usr/bin" ${srcdir}/${pkgname}/bwa
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install -Dm644 -t "${pkgdir}/usr/share/licenses/${pkgname}" ${pkgname}/COPYING
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cd $srcdir/${pkgname}
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install -Dm644 *.h -t "${pkgdir}/usr/include/bwa"
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}
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