r-rsubread: use metadata checks

BioArchLinux/r-rsubread/PKGBUILD

@@ -3,24 +3,26 @@
 _pkgname=Rsubread
 _pkgver=2.16.0
 pkgname=r-${_pkgname,,}
-pkgver=2.16.0
+pkgver=${_pkgver//-/.}
 pkgrel=1
-pkgdesc='Mapping, quantification and variant analysis of sequencing data'
-arch=('x86_64')
-url="https://bioconductor.org/packages/${_pkgname}"
-license=('GPL')
+pkgdesc="Mapping, quantification and variant analysis of sequencing data"
+arch=(x86_64)
+url="https://bioconductor.org/packages/$_pkgname"
+license=(GPL3)
 depends=(
   r
+  zlib
 )
 source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('8d6cf3be423626b190a00f718c833cdc480fb7b37ab817dbc80940d60646182e')
+md5sums=('317b014b1e15527a762636afb662dcca')
+b2sums=('e97f5adef823e223a7011e924a06f2a7d611eab27322a90af545e313eb5d2e92f36f060f27671aa4a2bf1c7ae87fc1c09f6479fc6a2a6d030e540b5a54799e8b')
 
 build() {
-  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+  mkdir build
+  R CMD INSTALL -l build "$_pkgname"
 }
 
 package() {
-  install -dm0755 "${pkgdir}/usr/lib/R/library"
-  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
 }
-# vim:set ts=2 sw=2 et:

BioArchLinux/r-rsubread/lilac.py

@@ -1,12 +1,16 @@
 #!/usr/bin/env python3
 from lilaclib import *
 
+import os
+import sys
+sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
+from lilac_r_utils import r_pre_build
+
 def pre_build():
-    for line in edit_file('PKGBUILD'):
-        if line.startswith('_pkgver='):
-            line = f'_pkgver={_G.newver}'
-        print(line)
-    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+    r_pre_build(
+        _G,
+        expect_license = "GPL (>=3)",
+    )
 
 def post_build():
     git_pkgbuild_commit()

BioArchLinux/r-rsubread/lilac.yaml

@@ -3,7 +3,13 @@ maintainers:
 - github: starsareintherose
   email: kuoi@bioarchlinux.org
 update_on:
-- regex: Rsubread_([\d._-]+).tar.gz
-  source: regex
-  url: https://bioconductor.org/packages/Rsubread
+- source: rpkgs
+  pkgname: Rsubread
+  repo: bioc
+  md5: true
 - alias: r
+- source: alpm
+  alpm: zlib
+  repo: core
+  provided: libz.so
+  strip_release: true