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python-mappy: fix depends() array in PKGBUILD

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bipin kumar 2023-04-28 23:10:50 +05:30
parent 4aa84447d1
commit 374db38cc9
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GPG key ID: C67233497C15E476
2 changed files with 10 additions and 9 deletions
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17
BioArchLinux/python-mappy/PKGBUILD
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@ -1,9 +1,9 @@
# Maintainer: Bipin Kumar <kbipinkumar@pm.me> # Maintainer: Bipin Kumar <kbipinkumar@pm.me>
pkgname=python-mappy pkgname=python-mappy
_module=minimap2 _source=minimap2
pkgver=2.25 pkgver=2.25
pkgrel=2 pkgrel=3
pkgdesc="Python interface to minimap2, a fast and accurate C program to align genomic and transcribe nucleotide sequences" pkgdesc="Python interface to minimap2, a fast and accurate C program to align genomic and transcribe nucleotide sequences"
arch=('x86_64') arch=('x86_64')
url="https://github.com/lh3/minimap2" url="https://github.com/lh3/minimap2"
@ -11,30 +11,31 @@ license=('MIT')
depends=( depends=(
'python' 'python'
'minimap2' 'minimap2'
'zlib'
'glibc'
) )
makedepends=( makedepends=(
'python-setuptools' 'python-setuptools'
'cython' 'cython'
'zlib'
'python-wheel' 'python-wheel'
) )
options=(!emptydirs) options=(!emptydirs)
source=("https://github.com/lh3/minimap2/archive/refs/tags/v$pkgver.tar.gz") source=(${_source}-${pkgver}.tar.gz::https://github.com/lh3/minimap2/archive/refs/tags/v${pkgver}.tar.gz)
sha256sums=('9742ff0be01e51ea7d65f70c01d1344eee6f0d7b135359e0c00aec30fb74ac38') sha256sums=('9742ff0be01e51ea7d65f70c01d1344eee6f0d7b135359e0c00aec30fb74ac38')
prepare() { prepare() {
cd "$_module-$pkgver" cd ${_source}-${pkgver}
sed -i 's|CFLAGS= -g -Wall -O2 -Wc++-compat #-Wextra|CFLAGS= -g -Wall -O2 -Wc++-compat -fPIC #-Wextra|g' Makefile sed -i 's|CFLAGS= -g -Wall -O2 -Wc++-compat #-Wextra|CFLAGS= -g -Wall -O2 -Wc++-compat -fPIC #-Wextra|g' Makefile
} }
build() { build() {
cd "$_module-$pkgver" cd ${_source}-${pkgver}
python setup.py build python setup.py build
} }
package() { package() {
cd "$_module-$pkgver" cd ${_source}-${pkgver}
python setup.py install --root="$pkgdir/" --optimize=1 --skip-build python setup.py install --root="$pkgdir/" --optimize=1 --skip-build
install -Dm644 "LICENSE.txt" -t "$pkgdir/usr/share/licenses/$pkgname" install -Dm644 "LICENSE.txt" "$pkgdir"/usr/share/licenses/${pkgname}/LICENSE
} }