Merge remote-tracking branch 'refs/remotes/origin/master'

BioArchLinux/bioarchlinux-mirrorlist/PKGBUILD

@@ -1,7 +1,7 @@
 # Maintainer: Guoyi
 
 pkgname=bioarchlinux-mirrorlist
-pkgver=2023.02.09
+pkgver=2023.03.22
 pkgrel=1
 pkgdesc="BioArchLinux mirror list for use by pacman"
 arch=('any')
@@ -9,7 +9,7 @@ url="https://github.com/BioArchLinux/mirror"
 license=('GPL')
 backup=(etc/pacman.d/mirrorlist.bio)
 source=(https://raw.githubusercontent.com/BioArchLinux/mirror/main/mirrorlist.bio)
-sha256sums=('8a90984620549313c521f12b8b4dea49275af9056959d966973f97a97ce41c63')
+sha256sums=('bf34baf5b9b662e63a714946c9de8548c85daab14e4f10ba570234bb8a723228')
 pkgver(){
   curl -sSi https://raw.githubusercontent.com/BioArchLinux/mirror/main/mirrorlist.bio | grep 'date' | sed 's/Jan/01/g;s/Feb/02/g;s/Mar/03/g;s/Apr/04/g;s/May/05/g;s/Jun/06/g;s/Jul/07/g;s/Aug/08/g;s/Sep/09/g;s/Oct/10/g;s/Nov/11/g;s/Dec/12/g' | awk '{print $5,$4,$3}' | sed 's/ /./g'
 }

BioArchLinux/bwa/PKGBUILD

@@ -2,7 +2,7 @@
 
 pkgname=bwa
 pkgver=0.7.17.r54.g139f68f
-pkgrel=4
+pkgrel=5
 pkgdesc="Burrows-Wheeler Aligner maps low-divergent sequences against a large reference genome. https://doi.org/10.1093/bioinformatics/btp324"
 arch=('x86_64')
 url="http://bio-bwa.sourceforge.net/"

BioArchLinux/freebayes/PKGBUILD

@@ -2,7 +2,7 @@
 # Contributor: Clint Valentine <valentine.clint@gmail.com>
 pkgname=freebayes
 pkgver=1.3.7
-pkgrel=0
+pkgrel=1
 pkgdesc="About Bayesian haplotype-based genetic polymorphism discovery and genotyping"
 arch=('x86_64')
 url="https://github.com/freebayes/freebayes"

BioArchLinux/seqlib/PKGBUILD

@@ -1,6 +1,6 @@
 pkgname=seqlib
 pkgver=1.2.0
-pkgrel=8
+pkgrel=9
 pkgdesc="C++ htslib/bwa-mem/fermi interface for interrogating sequence data"
 arch=('i686' 'x86_64')
 url="https://github.com/walaj/SeqLib"