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python-isal: fix build for version 1.7.0
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2 changed files with 27 additions and 6 deletions
19
BioArchLinux/abpoa/relax-cython-dep.patch
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19
BioArchLinux/abpoa/relax-cython-dep.patch
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Description: relax cython dependency to tolerate version 3.
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Older versions are no longer available in Debian.
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Author: Étienne Mollier <emollier@debian.org>
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Forwarded: not-needed
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Last-Update: 2024-07-20
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---
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This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
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--- abpoa.orig/setup.py
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+++ abpoa/setup.py
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@@ -69,7 +69,7 @@
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author_email = "gaoy1@chop.edu",
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license = "MIT",
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keywords = "multiple-sequence-alignment partial-order-graph-alignment",
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- setup_requires=["cython<3"], # see https://github.com/cython/cython/issues/5568
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+ setup_requires=["cython"], # see https://github.com/cython/cython/issues/5568
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# Build instructions
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ext_modules = [
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Extension(
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@ -2,15 +2,16 @@
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pkgname=python-isal
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_module=${pkgname#python-}
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pkgver=1.6.1
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pkgrel=2
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pkgver=1.7.0
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pkgrel=1
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pkgdesc='Faster zlib and gzip compatible compression and decompression by providing python bindings for the ISA-L library'
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arch=('x86_64')
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url="https://github.com/pycompression/python-isal"
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license=('PSF')
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depends=('python' 'glibc')
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depends=(
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'python'
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'glibc'
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)
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makedepends=(
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'python-build'
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'python-installer'
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@ -20,10 +21,11 @@ makedepends=(
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'python-sphinx'
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'python-sphinx_rtd_theme'
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'python-sphinx-argparse'
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'python-versioningit'
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)
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options=(!emptydirs)
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source=("https://files.pythonhosted.org/packages/source/${_module::1}/$_module/$_module-$pkgver.tar.gz")
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sha256sums=('7b64b75d260b544beea3f59cb25a6f520c04768818ef4ac316ee9a1f2ebf18f5')
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sha256sums=('9eb9457ed27fd0a8a7b403a5f4f9e6c8d1a44c2ca28ecd2f2bf3aed90b0a74bf')
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build() {
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cd "$_module-$pkgver"
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