Merge branch 'master' of github.com:BioArchLinux/Packages

phylosuite/PKGBUILD

@@ -0,0 +1,27 @@
+# Maintainer: malacology
+# Contributor: malacology
+
+pkgname=phylosuite
+pkgver=1.2.2
+pkgrel=1
+pkgdesc="an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies"
+arch=('x86_64')
+url="https://github.com/dongzhang0725/PhyloSuite"
+license=('GPL3')
+depends=(
+	'python>=3.6'
+)
+source=("https://github.com/dongzhang0725/PhyloSuite/releases/download/${pkgver}/PhyloSuite_v${pkgver}_Linux.tar.gz" "PhyloSuite.desktop" "PhyloSuite.png")
+md5sums=('9d43b3b2b9b076071f29f7c8f0689bd5'
+         '29b089eb8ab6a37d184f74cdfd21c569'
+         'aca08e388f8d6a180a570b31ccebe764')
+
+package() {
+  install -dm755 "$pkgdir"/usr/{bin/phylosuite,share/applications}
+  mv "$srcdir"/PhyloSuite/* "$pkgdir"/usr/bin/phylosuite
+  chmod -R 755  "$pkgdir"/usr/bin/phylosuite
+  chmod +x "$pkgdir"/usr/bin/phylosuite
+  "$pkgdir"/usr/bin/phylosuite/PhyloSuite
+  install -m 755 "$srcdir"/PhyloSuite.png "$pkgdir"/usr/bin/phylosuite/
+  install -m 755 "$srcdir"/PhyloSuite.desktop "$pkgdir"/usr/share/applications/
+}

phylosuite/PhyloSuite.desktop

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+PhyloSuite
+[Desktop Entry]
+Name=PhyloSuite
+MimeType=
+Exec=/usr/bin/phylosuite/PhyloSuite
+Type=Application
+Terminal=true
+Icon=/usr/bin/phylosuite/PhyloSuite.png
+Comment=PhyloSuite
+X-KDE-StartupNotify=false
+Categories=System;
+X-GNOME-UsesNotifications=true% 
+

phylosuite/lilac.py

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+#!/usr/bin/env python3
+
+from lilaclib import *
+
+def pre_build():
+  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
+  run_cmd(['updpkgsums'])
+
+def post_build():
+  git_add_files('PKGBUILD')
+  git_commit()

phylosuite/lilac.yaml

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+build_prefix: extra-x86_64
+maintainers:
+  - github: starsareintherose
+    email: starsareintherose@outlook.com
+update_on:
+  - source: github
+    github: dongzhang0725/PhyloSuite
+    use_latest_release: true