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2 changed files with 6 additions and 6 deletions
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@ -1,19 +1,19 @@
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# Maintainer: Clint Valentine <valentine.clint@gmail.com>
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# Maintainer: Clint Valentine <valentine.clint@gmail.com>
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pkgname=biobambam
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pkgname=biobambam
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pkgver=2.0.89_release_20180518145034
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pkgver=2.0.183_release_20210802180148
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pkgrel=1
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pkgrel=1
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_release=20180301132713
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pkgdesc="BAM file pre-processing utilities for bioinformatics."
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pkgdesc="BAM file pre-processing utilities for bioinformatics."
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arch=('x86_64')
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arch=('x86_64')
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url="https://github.com/gt1/biobambam2"
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url="https://github.com/gt1/biobambam2"
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license=('GPL3')
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license=('GPL3')
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makedepends=('libmaus')
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makedepends=('libmaus' 'autoconf' 'make' 'boost')
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source=(https://github.com/gt1/biobambam2/archive/refs/tags/${pkgver//_/-}.tar.gz)
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source=(https://gitlab.com/german.tischler/biobambam2/-/archive/${pkgver//_/-}/${pkgname}2-${pkgver//_/-}.tar.gz)
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sha256sums=('292a99d356f4523b31a18c79441fc387184ee13adf79682b040f88b4b2a05d27')
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sha256sums=('8712ceac509c389111b01dc3429f673dc0f8b77cb2bc48a1ebcf17f6888b2945')
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build() {
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build() {
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cd "${srcdir}"/"${pkgname}2"-"${pkgver//_/-}"
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cd "${srcdir}"/"${pkgname}2"-"${pkgver//_/-}"
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autoreconf -i -f
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./configure --prefix="${pkgdir}"/usr
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./configure --prefix="${pkgdir}"/usr
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}
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}
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@ -4,6 +4,6 @@ maintainers:
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email: starsareintherose@outlook.com
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email: starsareintherose@outlook.com
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update_on:
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update_on:
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- source: cmd
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- source: cmd
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cmd: curl -sS https://github.com/gt1/biobambam2/tags | grep '\-release-' | head -n 1 | sed 's/\// /g' | sed 's/"/ /g' | awk '{print $7}' | sed 's/-/_/g'
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cmd: curl -sS https://gitlab.com/german.tischler/biobambam2/-/tags | grep '\-release-' | head -n 1 | sed 's/</ /g' | sed 's/>/ /g' | awk '{print $5}' | sed 's/-/_/g'
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repo_depends:
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repo_depends:
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- libmaus
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- libmaus
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