Commit graph

41171 commits

Author SHA1 Message Date
b416829e80 trimmomatic: fix the binary check 2024-02-16 23:49:40 +08:00
baa6f61e65 trimmomatic: add adapters 2024-02-16 23:37:26 +08:00
Pekka Ristola
8a2892c510
r-this.path: fix optdepends 2024-02-16 14:36:37 +02:00
7d7b07be8a r-segmented: auto updated to 2.0.3-1 2024-02-16 12:04:13 +00:00
15ec2007a3 r-rbokeh: auto updated to 0.5.2-7 2024-02-16 12:03:33 +00:00
b1d56be18c r-dnet: auto updated to 1.1.7-7 2024-02-16 12:02:38 +00:00
8f910361a1 r-qlcmatrix: auto updated to 0.9.7-7 2024-02-16 12:01:58 +00:00
fc9d10d68d r-informeasure: auto updated to 1.12.1-1 2024-02-16 12:01:24 +00:00
Pekka Ristola
a664d10755
r-*: use archived CRAN sources for some packages
These packages have been removed from CRAN, but are required
by other packages and thus cannot be removed from the repo.

- r-dnet: dependency of r-pi and r-randomwalkrestartmh
- r-qlcmatrix: dependency of r-cliquems and r-monocle
- r-rbokeh: dependency of r-seqsqc
2024-02-16 13:14:45 +02:00
Pekka Ristola
eeba071842
r-informeasure: use latest sources 2024-02-16 13:08:29 +02:00
ef8bfeff76 last: auto updated to 1541-2 2024-02-16 09:30:07 +00:00
e7fa6cf26e last: fix doc 2024-02-16 17:29:17 +08:00
f2f22de97c last: add doc 2024-02-16 17:27:04 +08:00
82bdb1f0fe r-appreci8r: auto updated to 1.20.2-1 2024-02-16 00:36:20 +00:00
8657be2641 r-phyloprofile: auto updated to 1.16.2-1 2024-02-16 00:32:36 +00:00
0644b2d56f r-biocancer: auto updated to 1.30.7-1 2024-02-16 00:31:30 +00:00
1ad20d466c r-msstatsptm: auto updated to 2.4.4-1 2024-02-16 00:29:24 +00:00
839cc6e0bd r-corncob: auto updated to 0.4.1-2 2024-02-16 00:28:33 +00:00
c0e08fe559 r-beachmat: auto updated to 2.18.1-1 2024-02-16 00:27:59 +00:00
d2adbcfa70 r-hdf5array: auto updated to 1.30.1-1 2024-02-16 00:24:49 +00:00
2f38b3a5e1 r-seqarray: auto updated to 1.42.1-1 2024-02-16 00:23:57 +00:00
1db4736623 cctz: auto updated to 2.4-1 2024-02-16 00:23:04 +00:00
6494650686 afni: auto updated to 24.0.07-1 2024-02-16 00:22:27 +00:00
56524387f6 trinityrnaseq: fix java path 2024-02-16 05:57:10 +08:00
588c972ced trinityrnaseq: fix java path 2024-02-16 05:55:54 +08:00
f8fb59196d trinityrnaseq: fix file missing 2024-02-16 05:42:36 +08:00
4b8675b0f5 lua-luajson: auto updated to 1.3.4-10 2024-02-15 21:09:40 +00:00
eaf73ad645 trinityrnaseq: rm debug 2024-02-16 03:28:24 +08:00
83cae8d04b trinityrnaseq: auto updated to 2.15.1-1 2024-02-15 19:27:34 +00:00
579ada459c trinityrnaseq: fix arch 2024-02-16 03:23:34 +08:00
bd2f18b1f9 trinityrnaseq: fix pkgver 2024-02-16 03:21:19 +08:00
550b572d3f trinityrnaseq: init 2024-02-16 03:14:44 +08:00
Pekka Ristola
b82345a6c6
r-corncob: use metadata checks 2024-02-15 20:19:57 +02:00
5acf136ca5 r-heplots: auto updated to 1.6.2-1 2024-02-15 18:14:18 +00:00
440a105fb0 r-v8: auto updated to 4.4.2-1 2024-02-15 18:13:20 +00:00
c4e4f41289 r-rnifti: auto updated to 1.6.0-1 2024-02-15 18:12:39 +00:00
66c47abda0 tnt: auto updated to 2024.02.15-1 2024-02-15 18:12:02 +00:00
0ff48d69ce graphite-gtk-theme: auto updated to 2024.02.15-1 2024-02-15 18:10:51 +00:00
fa1d6e4771 r-metab: auto updated to 1.33.0-2 2024-02-15 18:09:36 +00:00
352e7ec443 r-cancersubtypes: auto updated to 1.26.0-2 2024-02-15 18:08:20 +00:00
9841a16210 r-regenrich: auto updated to 1.10.0-2 2024-02-15 18:07:45 +00:00
82e2f98cfb r-multiomicsviz: auto updated to 1.24.0-2 2024-02-15 18:06:34 +00:00
203fdfec6d r-flowmap: auto updated to 1.38.0-2 2024-02-15 18:05:52 +00:00
da50f76c80 r-lowmaca: auto updated to 1.28.0-3 2024-02-15 18:05:20 +00:00
237ec3ecf2 r-onesense: auto updated to 1.20.0-3 2024-02-15 18:03:53 +00:00
dbaa3f0a81 r-foldgo: auto updated to 1.18.0-2 2024-02-15 18:03:02 +00:00
e09087aff7 r-sscore: auto updated to 1.72.0-2 2024-02-15 18:02:19 +00:00
52144a62ad r-cancerinsilico: auto updated to 2.18.0-3 2024-02-15 18:01:50 +00:00
Pekka Ristola
4c71a31fc5
r-*: use old Bioconductor sources for some packages
These packages don't have a source archive in the latest
Bioconductor release.
2024-02-15 19:36:32 +02:00
cf8b3e348e r-parallelly: auto updated to 1.37.0-1 2024-02-15 12:01:23 +00:00