Commit graph

33971 commits

Author SHA1 Message Date
Pekka Ristola
f726729dcd
r-*: improve R package checking
- handle DESCRIPTION files with missing whitespace
- allow manually specifying expected NeedsCompilation value
2023-07-12 00:04:51 +03:00
6851af30cc fastp: auto updated to 0.23.4-6 2023-07-11 19:45:29 +00:00
ebdc53c452 fastp: clean up 2023-07-12 03:44:38 +08:00
d25eea7dc5 r-cliquems: auto updated to 1.14.1-1 2023-07-11 18:05:42 +00:00
1fdc31b29a r-structtoolbox: auto updated to 1.12.1-1 2023-07-11 18:04:32 +00:00
74c2898df8 r-icobra: auto updated to 1.28.1-1 2023-07-11 18:03:35 +00:00
7b82fdf6f8 r-bugsigdbr: auto updated to 1.6.3-1 2023-07-11 18:02:39 +00:00
7950fde0db r-gosemsim: auto updated to 2.26.1-1 2023-07-11 18:02:10 +00:00
3d663a868a r-matrixmodels: auto updated to 0.5.1-4 2023-07-11 18:01:25 +00:00
Pekka Ristola
e24b311b59
r-matrixmodels: use fixed version until r-matrix is updated
r-matrix=1.5.4.1 is provided by the base r package, but r-matrixmodels
0.5-2 requires r-matrix>=1.6.0

Use r-matrixmodels 0.5-1 until r-matrix gets updated along with the next
R release
2023-07-11 19:42:48 +03:00
6fcf4ee73c r-sf: auto updated to 1.0.14-1 2023-07-11 12:03:29 +00:00
dc18a2385a r-bayestools: auto updated to 0.2.16-1 2023-07-11 00:04:19 +00:00
093da4b0e5 r-rcppalgos: auto updated to 2.8.0-1 2023-07-11 00:03:43 +00:00
f34f48788d r-rcppspdlog: auto updated to 0.0.14-1 2023-07-11 00:02:30 +00:00
bf5f75f4cf mashmap: auto updated to 3.0.6-1 2023-07-11 00:01:44 +00:00
412b82d0d7 cdbfasta: auto updated to 2023.07.10-2 2023-07-11 00:01:23 +00:00
ba69d22948 r-alevinqc: auto updated to 1.16.1-1 2023-07-10 18:11:39 +00:00
58bcfacd51 r-scarray: auto updated to 1.8.3-1 2023-07-10 18:10:40 +00:00
a250365e31 r-affy: auto updated to 1.78.1-1 2023-07-10 18:09:43 +00:00
09148022eb python-ngs: auto updated to 3.0.6-1 2023-07-10 18:09:09 +00:00
d306b0b18c graphite-gtk-theme: auto updated to 2023.07.10-1 2023-07-10 18:02:29 +00:00
9b8a7dcc91 cdbfasta: auto updated to 2023.07.10-1 2023-07-10 18:01:25 +00:00
e791b9830d idba: auto updated to 1.1.3-3 2023-07-09 19:14:03 +00:00
e60d3ba3af Merge branch 'master' of github.com:BioArchLinux/Packages 2023-07-10 03:11:45 +08:00
7caa06ff84 idba: fix binary path 2023-07-10 03:11:26 +08:00
921ae1ee4f idba: auto updated to 1.1.3-2 2023-07-09 18:50:33 +00:00
a5a618c4e9 idba: correct 2023-07-10 02:49:29 +08:00
fb3b4b69ac idba: make can't install some binary 2023-07-10 02:46:42 +08:00
f086890263 idba: auto updated to 1.1.3-1 2023-07-09 18:39:13 +00:00
c87dcde602 idba: init 2023-07-10 02:37:06 +08:00
5f69603391 r-shinyjs: auto updated to 2.1.0-7 2023-07-09 18:02:25 +00:00
6e1e2ddb57 r-sourcetools: auto updated to 0.1.7.1-3 2023-07-09 18:01:54 +00:00
6e05ccd62a rosa: auto updated to 2023.07.09-1 2023-07-09 18:01:33 +00:00
d263d9e1bb trimmomatic: auto updated to 0.39-8 2023-07-09 17:21:10 +00:00
Bipin Kumar
8b6a1ebae6
seqan3: build from source tarball (#159)
* seqan3: build from source tarball

* seqan3: fix the submodule

---------

Co-authored-by: Kuoi <kuoi@bioarchlinux.org>
2023-07-10 01:19:35 +08:00
4018bc28c8 trimmomatic: make desc more standard 2023-07-10 01:07:11 +08:00
Pekka Ristola
fae761d738
r-shinyjs: use metadata checks 2023-07-09 15:34:08 +03:00
9d783d2574 soapnuke: auto updated to 2.1.7-1 2023-07-09 12:27:10 +00:00
190bc4b6b6 soapnuke: adjust regex 2023-07-09 20:26:27 +08:00
2833b7f8d9 soapnuke: init 2023-07-09 20:22:52 +08:00
Pekka Ristola
48a101adc9
r-sourcetools: use metadata checks 2023-07-09 15:20:13 +03:00
3c0927b7a6 r-webutils: auto updated to 1.1-7 2023-07-09 12:01:39 +00:00
64d277289a r-xtable: auto updated to 1.8.4-10 2023-07-09 12:01:10 +00:00
Pekka Ristola
e73830f04d
r-xtable: use metadata checks 2023-07-09 14:57:18 +03:00
Pekka Ristola
9db5632d6a
r-webutils: use metadata checks 2023-07-09 14:44:25 +03:00
9345550396 fastp: auto updated to 0.23.4-5 2023-07-09 10:24:41 +00:00
fd1f1180fc fastp: add license 2023-07-09 18:23:59 +08:00
79026b2bb7 fastp: auto updated to 0.23.4-4 2023-07-09 10:21:39 +00:00
8ffb4bcdf2 fastp: solve depends 2023-07-09 18:20:19 +08:00
dc47446862 fastp: auto updated to 0.23.4-3 2023-07-09 10:10:51 +00:00