Packages/README.md
2022-07-21 17:40:40 +01:00

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<h3 align="center">
<img src="https://raw.githubusercontent.com/BioArchLinux/Packages/master/logo/bioarchlinux.png" alt="BioArchLinux" width="150">
</p>
BioArchLinux</h3>
<h3 align="center">
<a href="https://wiki.bioarchlinux.org">Wiki</a> <a href="https://matrix.to/#/#bioarchlinux:matrix.org">Matrix</a> <a href="https://raw.githubusercontent.com/BioArchLinux/mirror/main/mirrorlist.bio">Mirror</a> <a href="https://repo.bioarchlinux.org">Repo</a> <a href="https://build.bioarchlinux.org">Status</a>
</h3>
## Special sponsor
<div>
<a href="https://v.ps/" target="_blank"><img height="70px" src="https://raw.githubusercontent.com/BioArchLinux/Packages/master/logo/xtom.png"></a>
</div>
## Usage
### ArchLinux and ArchLinux based distributions
Add the fllowing content to the `/etc/pacman.conf`
```
[bioarchlinux]
Server = https://repo.bioarchlinux.org/$arch
```
You can replace the `https://repo.bioarchlinux.org/$arch` with any mirror in [mirrorlist](https://raw.githubusercontent.com/BioArchLinux/mirror/main/mirrorlist.bio)
install GPG keyring to use bioarchlinux
```
# pacman-key --recv-keys B1F96021DB62254D
# pacman-key --finger B1F96021DB62254D
# pacman-key --lsign-key B1F96021DB62254D
```
update the database
```
# pacman -Syy
```
install any package
```
# pacman -S foo
```
### Windows
You can use [WSL](https://docs.microsoft.com/en-us/windows/wsl/install) to use our repo, see [here](https://github.com/BioArchLinux/wsl)
### Docker
You can use [docker](https://hub.docker.com/r/bioarchlinux/bioarchlinux) to use our repo, see [here](https://github.com/BioArchLinux/docker)
## Citation
> Zhang G. Hu Y. Drobot V. Staal J. Yi Y. Elliot MG. BioArchLinux: bioinformatics community with Arch Linux. F1000Research 2022 11: 809. https://doi.org/10.7490/f1000research.1119039.1