mirror of
https://github.com/BioArchLinux/Packages.git
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57 lines
1.2 KiB
Bash
57 lines
1.2 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=CRISPRseek
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_pkgver=1.42.0
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pkgname=r-${_pkgname,,}
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pkgver=1.42.0
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pkgrel=1
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pkgdesc='Design of target-specific guide RNAs in CRISPR-Cas9, genome-editing systems'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-biocgenerics
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r-biostrings
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r-bsgenome
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r-data.table
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r-delayedarray
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r-dplyr
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r-genomeinfodb
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r-genomicranges
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r-hash
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r-iranges
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r-keras
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r-mltools
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r-reticulate
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r-rhdf5
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r-s4vectors
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r-seqinr
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r-xvector
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)
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optdepends=(
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r-biocstyle
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r-bsgenome.hsapiens.ucsc.hg19
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r-bsgenome.mmusculus.ucsc.mm10
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r-lattice
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r-mass
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r-org.hs.eg.db
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r-org.mm.eg.db
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r-runit
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r-tensorflow
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r-testthat
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r-txdb.hsapiens.ucsc.hg19.knowngene
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r-txdb.mmusculus.ucsc.mm10.knowngene
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('7b8d8646f35dc00d7c8f18d84b8f030c4a9a116fd352590a6af7294135968c36')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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