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36 lines
1.3 KiB
Bash
36 lines
1.3 KiB
Bash
# Maintainer: Guoyi ("malacology") <guoyizhang at malacology.net>
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# Contributor: Guoyi ("malacology") <guoyizhang at malacology.net>
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# Contributor: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>
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pkgname=mrbayes-mpi
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pkgver=3.2.7
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pkgrel=2
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pkgdesc="MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models"
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arch=('i686' 'x86_64')
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url="nbisweden.github.io/mrbayes/"
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license=('GPL3')
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depends=('openmpi' 'readline''gcc')
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optdepends=('beagle-lib: for using GPU calculations among other enhancements - rebuild package after installing this dep')
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conflicts=(mrbayes)
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provides=(mrbayes)
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source=("https://github.com/NBISweden/MrBayes/archive/v${pkgver}.tar.gz")
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sha256sums=('64da39c01f606d0413ce90a1dd3c1ce2cbdef4cbad99aee8a4b2391a2e8db244')
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build() {
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cd ${srcdir}/MrBayes-$pkgver
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#Build with beagle-lib support if available:
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if [ -f /usr/lib/libhmsbeagle.so ]
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then
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msg "beagle-lib found! Building with CUDA support."
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./configure --with-beagle=/usr --prefix=${pkgdir}/usr --enable-mpi=yes
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else
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msg "beagle-lib not found! Building without CUDA support."
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./configure --with-beagle=no --prefix=${pkgdir}/usr --enable-mpi=yes
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fi
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make
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}
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package() {
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cd ${srcdir}/MrBayes-$pkgver
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make install
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install ${pkgdir}/usr/bin/mb ${pkgdir}/usr/bin/mb-mpi
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}
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